[출처] http://www.dreamy.pe.kr/zbxe/CodeClip/163266 HTML 파싱할 일이 생겼는데, 그동안은 그냥그냥 필요한 내용만 crummy에서 짬짬히 보다가, BeautifulSoup을 한국말로 잘 정리한 사이트를 찾았다. susukang98님의 블로그 : http://susukang98.springnote.com/pages/333771 예를 들자면, BeautifulSoup을 이용해서 특정 홈피의 ..
[출처] http://proy.tistory.com/261 파이썬의 XML파싱 라이브러리 BeautifulSoup는 요런 태그에서 동작하지 않는다. <data> <data> </data> </data> (같은 이름이 중첩되어 있음) 이걸 가능하게 하기 위해서 BeautifulSoup는 NESTABLE_TAGS라는 predefined set of tags를 제공한다. 다음과 같이 사용하면 된..
[출처] http://manime.tistory.com/146 Beautiful Soup을 이용하여 HTML Parsing 후 원하는 필드를 얻어오는 예제 view plaincopy to clipboardprint?import urllib2 from bs4 import BeautifulSoup import re urls = [("Facebook", "https://itunes.apple.com/us/app/facebook/id284882215?mt=8"), ("Skype", "https://itunes.apple.com/us/app/skype/id304878510?mt=8")] for name, ur..
[출처] http://cyramdiray.blogspot.kr/2012/12/beautifulsoup4.html BeautifulSoup은 파이썬에서 HTML을 파싱하기 위하여 많이 사용하는 툴입니다.http://www.crummy.com/software/BeautifulSoup/ 여기에서 다운받을 수 있고요 현재 최신 버전은 4.1.3입니다.파이썬 소스코드를 다운받아 이클립스에서 열어보니 다음 라인에 ..
Nucleic Acids Res. 2009 Jan;37(Database issue):D593-7. doi: 10.1093/nar/gkn582. Epub 2008 Sep 6. McDonald AG, Boyce S, Tipton KF.SourceSchool of Biochemistry and Immunology, Trinity College, Dublin 2, Ireland. amcdonld@tcd.ie AbstractExplorEnz is the MySQL database that is used for the curation and dissemination of the International Union of Biochemistry and Molecular Biology ..
PLoS One. 2009 Nov 11;4(11):e7710. doi: 10.1371/journal.pone.0007710. Kono N, Arakawa K, Ogawa R, Kido N, Oshita K, Ikegami K, Tamaki S, Tomita M.SourceInstitute for Advanced Biosciences, Keio University, Fujisawa, Japan. AbstractBACKGROUND:Biochemical pathways provide an essential context for understanding comprehensive experimental data and the systematic workings of a cell...
Bioinformatics. 2013 Mar 15;29(6):815-6. doi: 10.1093/bioinformatics/btt036. Epub 2013 Jan 28. Ganter M, Bernard T, Moretti S, Stelling J, Pagni M.SourceDepartment of Biosystems Science and Engineering, SIB Swiss Institute of Bioinformatics, ETH Zurich, 4058 Basel, Switzerland. AbstractMetaNetX.org is a website for accessing, analysing and manipulating genome-scale metabolic n..
Trends Microbiol. 2005 Nov;13(11):550-8. Epub 2005 Sep 19. Francke C, Siezen RJ, Teusink B.SourceWageningen Centre for Food Sciences, PO Box 557, 6700 AN Wageningen, the Netherlands. c.francke@cmbi.ru.nl AbstractThe prospect of understanding the relationship between the genome and the physiology of an organism is an important incentive to reconstruct metabolic networks. The fi..
Brief Bioinform. 2012 Nov 5. [Epub ahead of print] Lakshmanan M, Koh G, Chung BK, Lee DY.AbstractFlux balance analysis (FBA) is a widely used computational method for characterizing and engineering intrinsic cellular metabolism. The increasing number of its successful applications and growing popularity are possibly attributable to the availability of specific software tools f..
[출처] http://cran.r-project.org/web/packages/sybil/index.html The package sybil is a Systems Biology Library for R, implementing algorithms for constraint based analyses of metabolic networks (e.g. flux-balance analysis (FBA), minimization of metabolic adjustment (MOMA), regulatory on/off minimization (ROOM), robustness analysis and flux variability analysis). Version:1.1.1..